Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.72□□□□□ -0.69
Prox1P48437 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Prox1P48437 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.72□□□□□ -0.69
Prox1P48437 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Prox1P48437 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prox1P48437 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.71□□□□□ -0.69
Prox1P48437 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Gm15276-201ENSMUST00000145953 498 ntBASIC10.71□□□□□ -0.69
Prox1P48437 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Prox1P48437 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.71□□□□□ -0.69
Prox1P48437 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Gm27627-201ENSMUST00000183644 150 ntBASIC10.71□□□□□ -0.69
Prox1P48437 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.71□□□□□ -0.69
Prox1P48437 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.71□□□□□ -0.69
Prox1P48437 Gm18753-201ENSMUST00000201000 566 ntBASIC10.71□□□□□ -0.69
Prox1P48437 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.71□□□□□ -0.69
Prox1P48437 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.71□□□□□ -0.69
Prox1P48437 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.71□□□□□ -0.69
Prox1P48437 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Gm7940-201ENSMUST00000218195 769 ntBASIC10.71□□□□□ -0.69
Prox1P48437 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.71□□□□□ -0.69
Prox1P48437 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.71□□□□□ -0.69
Prox1P48437 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Prox1P48437 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Prox1P48437 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prox1P48437 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prox1P48437 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prox1P48437 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Prox1P48437 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prox1P48437 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prox1P48437 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prox1P48437 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Prox1P48437 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Prox1P48437 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Prox1P48437 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Prox1P48437 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Prox1P48437 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.7□□□□□ -0.7
Prox1P48437 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.7□□□□□ -0.7
Prox1P48437 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.7□□□□□ -0.7
Prox1P48437 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Prox1P48437 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Gm11573-201ENSMUST00000119956 394 ntBASIC10.7□□□□□ -0.7
Prox1P48437 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.7□□□□□ -0.7
Prox1P48437 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Prox1P48437 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms