Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sox18P43680 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gm13981-201ENSMUST00000122360 447 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gm24241-201ENSMUST00000157787 145 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox18P43680 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.04□□□□□ -0.64
Sox18P43680 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.04□□□□□ -0.64
Sox18P43680 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Gm37197-201ENSMUST00000195607 401 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.04□□□□□ -0.64
Sox18P43680 Gm43547-201ENSMUST00000197729 328 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Gm6450-201ENSMUST00000200896 574 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Sox18P43680 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.04□□□□□ -0.64
Sox18P43680 Gm26670-202ENSMUST00000226862 340 ntBASIC11.04□□□□□ -0.64
Sox18P43680 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gm8181-201ENSMUST00000062242 669 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sox18P43680 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sox18P43680 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sox18P43680 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Gm44090-201ENSMUST00000204669 1834 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sox18P43680 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Gm15394-201ENSMUST00000119656 1308 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Gm7680-201ENSMUST00000216198 1348 ntBASIC11.04□□□□□ -0.64
Sox18P43680 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox18P43680 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox18P43680 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Gm42462-201ENSMUST00000196543 1363 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Phf7-206ENSMUST00000228437 1373 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox18P43680 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm23612-201ENSMUST00000103823 110 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox18P43680 Gm25317-201ENSMUST00000116824 129 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Gm15529-201ENSMUST00000121833 994 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox18P43680 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox18P43680 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm10807-201ENSMUST00000177134 795 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Gm23576-201ENSMUST00000179918 110 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Gm7741-201ENSMUST00000181445 989 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox18P43680 Gm33571-201ENSMUST00000193271 657 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Gm38233-201ENSMUST00000194259 807 ntBASIC11.03□□□□□ -0.64
Sox18P43680 BB187690-201ENSMUST00000198619 1176 ntBASIC11.03□□□□□ -0.64
Sox18P43680 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Gm18996-201ENSMUST00000214851 755 ntBASIC11.03□□□□□ -0.64
Sox18P43680 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.03□□□□□ -0.64
Sox18P43680 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Sox18P43680 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Sox18P43680 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox18P43680 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms