Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11□□□□□ -0.65
Cd9P40240 Id2-203ENSMUST00000222667 958 ntBASIC11□□□□□ -0.65
Cd9P40240 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11□□□□□ -0.65
Cd9P40240 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11□□□□□ -0.65
Cd9P40240 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Gm43014-201ENSMUST00000198568 2443 ntBASIC11□□□□□ -0.65
Cd9P40240 Gm8899-201ENSMUST00000214635 1332 ntBASIC11□□□□□ -0.65
Cd9P40240 Gfra2-203ENSMUST00000227697 1323 ntBASIC11□□□□□ -0.65
Cd9P40240 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cd9P40240 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11□□□□□ -0.65
Cd9P40240 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cd9P40240 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cd9P40240 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cd9P40240 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd9P40240 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cd9P40240 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.99□□□□□ -0.65
Cd9P40240 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd9P40240 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Cd9P40240 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.99□□□□□ -0.65
Cd9P40240 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd9P40240 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.99□□□□□ -0.65
Cd9P40240 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cd9P40240 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Gm16165-201ENSMUST00000160140 795 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cd9P40240 Gm17391-201ENSMUST00000171036 126 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.99□□□□□ -0.65
Cd9P40240 Gm23771-201ENSMUST00000178702 110 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cd9P40240 Gm7985-201ENSMUST00000183329 981 ntBASIC10.99□□□□□ -0.65
Cd9P40240 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.99□□□□□ -0.65
Cd9P40240 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Gm43520-201ENSMUST00000197996 164 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Gm5865-201ENSMUST00000198713 637 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Gm44100-201ENSMUST00000204329 436 ntBASIC10.99□□□□□ -0.65
Cd9P40240 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Gm18042-201ENSMUST00000219887 790 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.99□□□□□ -0.65
Cd9P40240 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.99□□□□□ -0.65
Cd9P40240 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.99□□□□□ -0.65
Cd9P40240 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cd9P40240 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Cd9P40240 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd9P40240 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cd9P40240 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cd9P40240 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.98□□□□□ -0.65
Cd9P40240 Gm11246-201ENSMUST00000120880 345 ntBASIC10.98□□□□□ -0.65
Cd9P40240 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.98□□□□□ -0.65
Cd9P40240 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cd9P40240 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms