Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.2□□□□□ -0.94
Timp3P39876 Gm25766-201ENSMUST00000104101 131 ntBASIC9.2□□□□□ -0.94
Timp3P39876 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.2□□□□□ -0.94
Timp3P39876 Gm16219-201ENSMUST00000120096 274 ntBASIC9.2□□□□□ -0.94
Timp3P39876 Gm12899-201ENSMUST00000120565 551 ntBASIC9.2□□□□□ -0.94
Timp3P39876 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.2□□□□□ -0.94
Timp3P39876 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Gm24398-201ENSMUST00000157870 109 ntBASIC9.2□□□□□ -0.94
Timp3P39876 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.2□□□□□ -0.94
Timp3P39876 Gm26134-201ENSMUST00000178484 110 ntBASIC9.2□□□□□ -0.94
Timp3P39876 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9.2□□□□□ -0.94
Timp3P39876 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.2□□□□□ -0.94
Timp3P39876 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Gm18065-201ENSMUST00000221395 526 ntBASIC9.2□□□□□ -0.94
Timp3P39876 Gm19009-201ENSMUST00000223072 823 ntBASIC9.2□□□□□ -0.94
Timp3P39876 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.2□□□□□ -0.94
Timp3P39876 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
Timp3P39876 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.2□□□□□ -0.94
Timp3P39876 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Timp3P39876 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Timp3P39876 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.19□□□□□ -0.94
Timp3P39876 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Timp3P39876 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.19□□□□□ -0.94
Timp3P39876 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Timp3P39876 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.19□□□□□ -0.94
Timp3P39876 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Timp3P39876 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.19□□□□□ -0.94
Timp3P39876 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.19□□□□□ -0.94
Timp3P39876 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.19□□□□□ -0.94
Timp3P39876 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Timp3P39876 Gm10731-201ENSMUST00000181171 448 ntBASIC9.19□□□□□ -0.94
Timp3P39876 Gm37905-201ENSMUST00000195310 341 ntBASIC9.19□□□□□ -0.94
Timp3P39876 Gm44329-201ENSMUST00000197469 112 ntBASIC9.19□□□□□ -0.94
Timp3P39876 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.19□□□□□ -0.94
Timp3P39876 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.19□□□□□ -0.94
Timp3P39876 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms