Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp4P35123 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp4P35123 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp4P35123 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.71□□□□□ -0.53
Usp4P35123 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 Gm19459-201ENSMUST00000176240 835 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Gm19353-201ENSMUST00000184561 445 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm9353-201ENSMUST00000200472 604 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm9555-201ENSMUST00000200908 583 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm5051-201ENSMUST00000204085 485 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm6905-201ENSMUST00000205729 511 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm270-201ENSMUST00000223010 976 ntBASIC11.71□□□□□ -0.53
Usp4P35123 Gm1821-202ENSMUST00000227415 750 ntBASIC11.71□□□□□ -0.53
Usp4P35123 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.71□□□□□ -0.53
Usp4P35123 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Usp4P35123 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Usp4P35123 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.71□□□□□ -0.53
Usp4P35123 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Usp4P35123 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Usp4P35123 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Usp4P35123 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.71□□□□□ -0.54
Usp4P35123 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Usp4P35123 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Usp4P35123 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Usp4P35123 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Usp4P35123 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Usp4P35123 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Usp4P35123 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Usp4P35123 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Usp4P35123 Gm12165-201ENSMUST00000117047 342 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Gm12196-201ENSMUST00000120954 262 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Gm15782-201ENSMUST00000121073 445 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.7□□□□□ -0.54
Usp4P35123 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.7□□□□□ -0.54
Usp4P35123 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Gm42790-201ENSMUST00000201268 969 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Gm44545-201ENSMUST00000208262 746 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.7□□□□□ -0.54
Usp4P35123 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 AA474408-201ENSMUST00000098110 3339 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.7□□□□□ -0.54
Usp4P35123 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Usp4P35123 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Usp4P35123 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Usp4P35123 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Usp4P35123 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Usp4P35123 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Usp4P35123 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Usp4P35123 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Usp4P35123 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.69□□□□□ -0.54
Usp4P35123 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.69□□□□□ -0.54
Usp4P35123 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Usp4P35123 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Usp4P35123 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Usp4P35123 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Usp4P35123 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Usp4P35123 Gm13045-201ENSMUST00000119019 712 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms