Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VimP20152 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VimP20152 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.24□□□□□ -0.61
VimP20152 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Gm16478-201ENSMUST00000208113 5084 ntBASIC11.24□□□□□ -0.61
VimP20152 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.24□□□□□ -0.61
VimP20152 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.24□□□□□ -0.61
VimP20152 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Gm9230-201ENSMUST00000188228 532 ntBASIC11.24□□□□□ -0.61
VimP20152 Gm38321-201ENSMUST00000195053 235 ntBASIC11.24□□□□□ -0.61
VimP20152 Gm37301-201ENSMUST00000195412 568 ntBASIC11.24□□□□□ -0.61
VimP20152 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.24□□□□□ -0.61
VimP20152 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.24□□□□□ -0.61
VimP20152 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.24□□□□□ -0.61
VimP20152 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
VimP20152 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.24□□□□□ -0.61
VimP20152 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.24□□□□□ -0.61
VimP20152 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.24□□□□□ -0.61
VimP20152 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.24□□□□□ -0.61
VimP20152 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.24□□□□□ -0.61
VimP20152 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.24□□□□□ -0.61
VimP20152 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VimP20152 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.23□□□□□ -0.61
VimP20152 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VimP20152 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Gm10434-201ENSMUST00000101158 471 ntBASIC11.23□□□□□ -0.61
VimP20152 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Gm27437-201ENSMUST00000183429 107 ntBASIC11.23□□□□□ -0.61
VimP20152 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.23□□□□□ -0.61
VimP20152 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.23□□□□□ -0.61
VimP20152 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.23□□□□□ -0.61
VimP20152 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
VimP20152 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VimP20152 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
VimP20152 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.22□□□□□ -0.61
VimP20152 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
VimP20152 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
VimP20152 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VimP20152 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms