Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.06□□□□□ -0.96
Cdx1P18111 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.06□□□□□ -0.96
Cdx1P18111 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.06□□□□□ -0.96
Cdx1P18111 Gm28450-201ENSMUST00000187349 638 ntBASIC9.06□□□□□ -0.96
Cdx1P18111 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.06□□□□□ -0.96
Cdx1P18111 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
Cdx1P18111 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.06□□□□□ -0.96
Cdx1P18111 Gm44262-201ENSMUST00000204969 372 ntBASIC9.06□□□□□ -0.96
Cdx1P18111 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.06□□□□□ -0.96
Cdx1P18111 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC9.06□□□□□ -0.96
Cdx1P18111 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.06□□□□□ -0.96
Cdx1P18111 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Cdx1P18111 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Cdx1P18111 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Cdx1P18111 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.06□□□□□ -0.96
Cdx1P18111 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cdx1P18111 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cdx1P18111 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cdx1P18111 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.06□□□□□ -0.96
Cdx1P18111 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm14263-201ENSMUST00000117955 746 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Gm9083-201ENSMUST00000120423 819 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm16296-201ENSMUST00000159905 325 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm37597-201ENSMUST00000191853 382 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.05□□□□□ -0.96
Cdx1P18111 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.05□□□□□ -0.96
Cdx1P18111 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm10254-201ENSMUST00000052888 867 ntBASIC9.05□□□□□ -0.96
Cdx1P18111 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cdx1P18111 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cdx1P18111 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.05□□□□□ -0.96
Cdx1P18111 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cdx1P18111 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms