Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.17□□□□□ -0.46
Chmp6P0C0A3 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.17□□□□□ -0.46
Chmp6P0C0A3 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.17□□□□□ -0.46
Chmp6P0C0A3 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Gm10179-201ENSMUST00000086233 688 ntBASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chmp6P0C0A3 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm13888-201ENSMUST00000119148 422 ntBASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm3551-201ENSMUST00000190750 664 ntBASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chmp6P0C0A3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm7467-201ENSMUST00000185173 652 ntBASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm37299-201ENSMUST00000193951 826 ntBASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm44980-201ENSMUST00000205826 314 ntBASIC12.15□□□□□ -0.46
Chmp6P0C0A3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chmp6P0C0A3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp6P0C0A3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chmp6P0C0A3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp6P0C0A3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chmp6P0C0A3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms