Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gfra2-203ENSMUST00000227697 1323 ntBASIC14.39□□□□□ -0.11
Hoxc9P09633 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc9P09633 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc9P09633 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Gm45124-201ENSMUST00000206723 2755 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc9P09633 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc9P09633 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxc9P09633 Gm5808-201ENSMUST00000178090 357 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxc9P09633 Gm42732-201ENSMUST00000202887 1197 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Gm6794-201ENSMUST00000203829 457 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 AC154759.1-201ENSMUST00000224137 1159 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc9P09633 Gm25514-201ENSMUST00000083860 135 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc9P09633 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.38□□□□□ -0.11
Hoxc9P09633 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc9P09633 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hoxc9P09633 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc9P09633 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Mir6953-201ENSMUST00000184745 68 ntBASIC14.37□□□□□ -0.11
Hoxc9P09633 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC14.37□□□□□ -0.11
Hoxc9P09633 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC14.37□□□□□ -0.11
Hoxc9P09633 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.37□□□□□ -0.11
Hoxc9P09633 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc9P09633 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc9P09633 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.36□□□□□ -0.11
Hoxc9P09633 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc9P09633 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc9P09633 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Mir181d-201ENSMUST00000102383 72 ntBASIC14.36□□□□□ -0.11
Hoxc9P09633 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm5254-201ENSMUST00000188353 977 ntBASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm18555-201ENSMUST00000197935 584 ntBASIC14.36□□□□□ -0.11
Hoxc9P09633 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Gm45745-201ENSMUST00000211447 1180 ntBASIC14.36□□□□□ -0.11
Hoxc9P09633 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc9P09633 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms