Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hoxb3P09026 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hoxb3P09026 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm19210-201ENSMUST00000199562 1350 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm25766-201ENSMUST00000104101 131 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm12663-201ENSMUST00000118481 958 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm15741-201ENSMUST00000119401 754 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm26174-201ENSMUST00000158415 219 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.44□□□□□ -0.58
Hoxb3P09026 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm44681-201ENSMUST00000208447 842 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 AC159886.1-201ENSMUST00000217099 1091 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Gm46436-201ENSMUST00000221851 1294 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxb3P09026 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.44□□□□□ -0.58
Hoxb3P09026 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxb3P09026 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Hoxb3P09026 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.43□□□□□ -0.58
Hoxb3P09026 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Gm23272-201ENSMUST00000104053 129 ntBASIC11.43□□□□□ -0.58
Hoxb3P09026 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxb3P09026 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxb3P09026 Gm27845-201ENSMUST00000184479 114 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms