Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.28□□□□□ -0.92
CfdP03953 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
CfdP03953 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Gm14109-201ENSMUST00000118814 309 ntBASIC9.28□□□□□ -0.92
CfdP03953 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.28□□□□□ -0.92
CfdP03953 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.28□□□□□ -0.92
CfdP03953 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.28□□□□□ -0.92
CfdP03953 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
CfdP03953 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
CfdP03953 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.28□□□□□ -0.92
CfdP03953 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.28□□□□□ -0.92
CfdP03953 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.28□□□□□ -0.92
CfdP03953 Gm37489-201ENSMUST00000191883 159 ntBASIC9.28□□□□□ -0.92
CfdP03953 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.28□□□□□ -0.92
CfdP03953 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
CfdP03953 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.28□□□□□ -0.92
CfdP03953 Gm10608-202ENSMUST00000213924 676 ntBASIC9.28□□□□□ -0.92
CfdP03953 Gm7653-201ENSMUST00000214567 508 ntBASIC9.28□□□□□ -0.92
CfdP03953 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.28□□□□□ -0.92
CfdP03953 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
CfdP03953 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CfdP03953 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.28□□□□□ -0.92
CfdP03953 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CfdP03953 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.92
CfdP03953 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.27□□□□□ -0.92
CfdP03953 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.27□□□□□ -0.92
CfdP03953 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CfdP03953 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.27□□□□□ -0.92
CfdP03953 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.27□□□□□ -0.93
CfdP03953 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CfdP03953 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.27□□□□□ -0.93
CfdP03953 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Gm15370-201ENSMUST00000117158 253 ntBASIC9.27□□□□□ -0.93
CfdP03953 Gm5187-201ENSMUST00000117317 991 ntBASIC9.27□□□□□ -0.93
CfdP03953 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Gm8459-201ENSMUST00000162504 760 ntBASIC9.27□□□□□ -0.93
CfdP03953 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.27□□□□□ -0.93
CfdP03953 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.27□□□□□ -0.93
CfdP03953 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.27□□□□□ -0.93
CfdP03953 Gm38151-201ENSMUST00000195085 289 ntBASIC9.27□□□□□ -0.93
CfdP03953 Rprl1-202ENSMUST00000198476 238 ntBASIC9.27□□□□□ -0.93
CfdP03953 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.27□□□□□ -0.93
CfdP03953 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.27□□□□□ -0.93
CfdP03953 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CfdP03953 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CfdP03953 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.27□□□□□ -0.93
CfdP03953 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
CfdP03953 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.27□□□□□ -0.93
CfdP03953 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CfdP03953 Btrc-206ENSMUST00000224102 3037 ntBASIC9.27□□□□□ -0.93
CfdP03953 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
CfdP03953 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CfdP03953 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
CfdP03953 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CfdP03953 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CfdP03953 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms