Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm25076-201ENSMUST00000104098 132 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm12247-201ENSMUST00000117585 670 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm27910-201ENSMUST00000185004 107 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm5996-201ENSMUST00000211110 718 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.68□□□□□ -0.7
Sh3yl1O08641 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sh3yl1O08641 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm11500-201ENSMUST00000118237 601 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm11246-201ENSMUST00000120880 345 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Mir3547-201ENSMUST00000175461 88 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm37299-201ENSMUST00000193951 826 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm9645-201ENSMUST00000197131 792 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Sh3yl1O08641 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.67□□□□□ -0.7
Sh3yl1O08641 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sh3yl1O08641 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms