Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc180J3QNE4 Gm13608-201ENSMUST00000121807 1406 ntBASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Gm15258-201ENSMUST00000153801 741 ntBASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Gm6686-201ENSMUST00000178455 258 ntBASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Gm37860-201ENSMUST00000195380 1034 ntBASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Gm5738-201ENSMUST00000206016 779 ntBASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc180J3QNE4 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc180J3QNE4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc180J3QNE4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc180J3QNE4 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc180J3QNE4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc180J3QNE4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc180J3QNE4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ccdc180J3QNE4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gm13700-201ENSMUST00000118624 1128 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gm14148-201ENSMUST00000122433 1008 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gm29543-201ENSMUST00000188138 967 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gm9409-201ENSMUST00000197017 316 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gm44388-201ENSMUST00000204350 258 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 AC161172.1-201ENSMUST00000227801 486 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gm8876-201ENSMUST00000120768 1122 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 AC107752.1-201ENSMUST00000219362 469 ntBASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccdc180J3QNE4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Nudt18-202ENSMUST00000228554 3619 ntBASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gm14639-201ENSMUST00000120850 866 ntBASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gm6560-201ENSMUST00000198588 1591 ntBASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 CT030035.1-201ENSMUST00000223964 935 ntBASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 AC129217.1-201ENSMUST00000225181 642 ntBASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc180J3QNE4 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Gm11235-201ENSMUST00000117763 333 ntBASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Gm22994-201ENSMUST00000175422 82 ntBASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc180J3QNE4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms