Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Gm3198-201ENSMUST00000208725 1026 ntBASIC8.89□□□□□ -0.99
Usp9yF8VPU6 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm9947-201ENSMUST00000067599 2920 ntBASIC8.89□□□□□ -0.99
Usp9yF8VPU6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 AC151836.1-201ENSMUST00000228730 1637 ntBASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm6211-201ENSMUST00000147973 4275 ntBASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm13543-201ENSMUST00000121230 796 ntBASIC8.89□□□□□ -0.99
Usp9yF8VPU6 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Usp9yF8VPU6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 AC116596.1-201ENSMUST00000228112 1762 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm7104-201ENSMUST00000179741 2532 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm15539-201ENSMUST00000118452 566 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm14156-201ENSMUST00000121538 483 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm7589-201ENSMUST00000085631 534 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Olfml3-204ENSMUST00000169286 874 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm9574-201ENSMUST00000173127 845 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm6317-201ENSMUST00000183159 1000 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm9409-201ENSMUST00000197017 316 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm44640-201ENSMUST00000206894 247 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 AC122891.1-201ENSMUST00000218671 268 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm37861-201ENSMUST00000193534 2869 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Gm27196-201ENSMUST00000184787 2582 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Usp9yF8VPU6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms