Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc188F6WEU2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm15539-201ENSMUST00000118452 566 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm8864-201ENSMUST00000118653 1010 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm12240-201ENSMUST00000120178 229 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm17764-201ENSMUST00000185925 391 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm44460-201ENSMUST00000196179 129 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm33080-201ENSMUST00000205429 172 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Gm8796-201ENSMUST00000219122 936 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc188F6WEU2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm22900-201ENSMUST00000104538 130 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm11686-201ENSMUST00000122397 333 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm7539-201ENSMUST00000189789 630 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm2328-201ENSMUST00000193525 535 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm43965-201ENSMUST00000203779 789 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 AC130217.1-201ENSMUST00000224146 909 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm16410-201ENSMUST00000094550 774 ntBASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc188F6WEU2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms