Protein–RNA interactions for Protein: S4R1R7

Rpl9-ps1, MCG50795, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps1S4R1R7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl9-ps1S4R1R7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpl9-ps1S4R1R7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpl9-ps1S4R1R7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.09■□□□□ 0.97
Rpl9-ps1S4R1R7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl9-ps1S4R1R7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl9-ps1S4R1R7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl9-ps1S4R1R7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl9-ps1S4R1R7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl9-ps1S4R1R7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpl9-ps1S4R1R7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Rpl9-ps1S4R1R7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpl9-ps1S4R1R7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpl9-ps1S4R1R7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpl9-ps1S4R1R7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.04■□□□□ 0.96
Rpl9-ps1S4R1R7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl9-ps1S4R1R7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl9-ps1S4R1R7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl9-ps1S4R1R7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpl9-ps1S4R1R7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.03■□□□□ 0.96
Rpl9-ps1S4R1R7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rpl9-ps1S4R1R7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rpl9-ps1S4R1R7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rpl9-ps1S4R1R7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpl9-ps1S4R1R7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.02■□□□□ 0.96
Rpl9-ps1S4R1R7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Rpl9-ps1S4R1R7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Rpl9-ps1S4R1R7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Gm12821-201ENSMUST00000120022 600 ntBASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpl9-ps1S4R1R7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms