Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcb1Q9Z0H3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcb1Q9Z0H3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.06■□□□□ 0.96
Smarcb1Q9Z0H3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcb1Q9Z0H3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcb1Q9Z0H3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcb1Q9Z0H3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcb1Q9Z0H3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcb1Q9Z0H3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Smarcb1Q9Z0H3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Smarcb1Q9Z0H3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcb1Q9Z0H3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcb1Q9Z0H3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcb1Q9Z0H3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcb1Q9Z0H3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Gm26833-201ENSMUST00000180899 440 ntBASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcb1Q9Z0H3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcb1Q9Z0H3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarcb1Q9Z0H3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Gm18284-201ENSMUST00000172604 624 ntBASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Gm8495-201ENSMUST00000188740 694 ntBASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcb1Q9Z0H3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcb1Q9Z0H3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21■□□□□ 0.95
Smarcb1Q9Z0H3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcb1Q9Z0H3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcb1Q9Z0H3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcb1Q9Z0H3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcb1Q9Z0H3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarcb1Q9Z0H3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcb1Q9Z0H3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Smarcb1Q9Z0H3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 183.5 ms