Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cx3cr1Q9Z0D9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.1■□□□□ 0.33
Cx3cr1Q9Z0D9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.1■□□□□ 0.33
Cx3cr1Q9Z0D9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cx3cr1Q9Z0D9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cx3cr1Q9Z0D9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cx3cr1Q9Z0D9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cr1Q9Z0D9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cr1Q9Z0D9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.08■□□□□ 0.33
Cx3cr1Q9Z0D9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cr1Q9Z0D9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cx3cr1Q9Z0D9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cx3cr1Q9Z0D9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.08■□□□□ 0.32
Cx3cr1Q9Z0D9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cr1Q9Z0D9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Gm14523-201ENSMUST00000117260 558 ntBASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.06■□□□□ 0.32
Cx3cr1Q9Z0D9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cr1Q9Z0D9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cr1Q9Z0D9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cr1Q9Z0D9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.02■□□□□ 0.32
Cx3cr1Q9Z0D9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms