Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.3■□□□□ 0.68
Lhx9Q9WUH2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx9Q9WUH2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Lhx9Q9WUH2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Gm43137-201ENSMUST00000198052 594 ntBASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx9Q9WUH2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx9Q9WUH2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx9Q9WUH2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lhx9Q9WUH2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx9Q9WUH2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx9Q9WUH2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lhx9Q9WUH2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lhx9Q9WUH2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx9Q9WUH2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Gm6139-201ENSMUST00000079261 882 ntBASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lhx9Q9WUH2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx9Q9WUH2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx9Q9WUH2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx9Q9WUH2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx9Q9WUH2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx9Q9WUH2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx9Q9WUH2 Mir7075-201ENSMUST00000184187 82 ntBASIC19.21■□□□□ 0.67
Lhx9Q9WUH2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx9Q9WUH2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx9Q9WUH2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx9Q9WUH2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms