Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn8aQ9WTU3 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.61■□□□□ 0.89
Scn8aQ9WTU3 Serp2-204ENSMUST00000228055 705 ntBASIC20.61■□□□□ 0.89
Scn8aQ9WTU3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn8aQ9WTU3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn8aQ9WTU3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn8aQ9WTU3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn8aQ9WTU3 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.6■□□□□ 0.89
Scn8aQ9WTU3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn8aQ9WTU3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn8aQ9WTU3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scn8aQ9WTU3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Scn8aQ9WTU3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Mir7075-201ENSMUST00000184187 82 ntBASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn8aQ9WTU3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn8aQ9WTU3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scn8aQ9WTU3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn8aQ9WTU3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scn8aQ9WTU3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn8aQ9WTU3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Scn8aQ9WTU3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn8aQ9WTU3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.54■□□□□ 0.88
Scn8aQ9WTU3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn8aQ9WTU3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn8aQ9WTU3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scn8aQ9WTU3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn8aQ9WTU3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn8aQ9WTU3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scn8aQ9WTU3 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Scn8aQ9WTU3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn8aQ9WTU3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.52■□□□□ 0.88
Scn8aQ9WTU3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn8aQ9WTU3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Scn8aQ9WTU3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn8aQ9WTU3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Scn8aQ9WTU3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms