Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Atp6ap1Q9R1Q9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atp6ap1Q9R1Q9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atp6ap1Q9R1Q9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atp6ap1Q9R1Q9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
Atp6ap1Q9R1Q9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Atp6ap1Q9R1Q9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Atp6ap1Q9R1Q9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp6ap1Q9R1Q9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atp6ap1Q9R1Q9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.75■□□□□ 0.75
Atp6ap1Q9R1Q9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Atp6ap1Q9R1Q9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp6ap1Q9R1Q9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp6ap1Q9R1Q9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atp6ap1Q9R1Q9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Atp6ap1Q9R1Q9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp6ap1Q9R1Q9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp6ap1Q9R1Q9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp6ap1Q9R1Q9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.69■□□□□ 0.74
Atp6ap1Q9R1Q9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp6ap1Q9R1Q9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp6ap1Q9R1Q9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms