Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubd1Q9R1K7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tubd1Q9R1K7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.72■□□□□ 0.91
Tubd1Q9R1K7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Tubd1Q9R1K7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tubd1Q9R1K7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Tubd1Q9R1K7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.72■□□□□ 0.91
Tubd1Q9R1K7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubd1Q9R1K7 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.71■□□□□ 0.91
Tubd1Q9R1K7 Mir6236-201ENSMUST00000184437 123 ntBASIC20.71■□□□□ 0.91
Tubd1Q9R1K7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubd1Q9R1K7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubd1Q9R1K7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tubd1Q9R1K7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tubd1Q9R1K7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tubd1Q9R1K7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubd1Q9R1K7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.7■□□□□ 0.9
Tubd1Q9R1K7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubd1Q9R1K7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Tubd1Q9R1K7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tubd1Q9R1K7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubd1Q9R1K7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tubd1Q9R1K7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tubd1Q9R1K7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubd1Q9R1K7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tubd1Q9R1K7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Tubd1Q9R1K7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubd1Q9R1K7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubd1Q9R1K7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tubd1Q9R1K7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tubd1Q9R1K7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tubd1Q9R1K7 Gm9847-201ENSMUST00000052528 599 ntBASIC20.67■□□□□ 0.9
Tubd1Q9R1K7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubd1Q9R1K7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubd1Q9R1K7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tubd1Q9R1K7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tubd1Q9R1K7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubd1Q9R1K7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Tubd1Q9R1K7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tubd1Q9R1K7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Tubd1Q9R1K7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tubd1Q9R1K7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubd1Q9R1K7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubd1Q9R1K7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.63■□□□□ 0.89
Tubd1Q9R1K7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubd1Q9R1K7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.63■□□□□ 0.89
Tubd1Q9R1K7 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubd1Q9R1K7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms