Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.78■□□□□ 0.92
Rfwd2Q9R1A8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfwd2Q9R1A8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfwd2Q9R1A8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfwd2Q9R1A8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.77■□□□□ 0.92
Rfwd2Q9R1A8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfwd2Q9R1A8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfwd2Q9R1A8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rfwd2Q9R1A8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd2Q9R1A8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd2Q9R1A8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd2Q9R1A8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfwd2Q9R1A8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Rfwd2Q9R1A8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfwd2Q9R1A8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfwd2Q9R1A8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rfwd2Q9R1A8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfwd2Q9R1A8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Rfwd2Q9R1A8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd2Q9R1A8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.7■□□□□ 0.9
Rfwd2Q9R1A8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd2Q9R1A8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.7■□□□□ 0.9
Rfwd2Q9R1A8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfwd2Q9R1A8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.7■□□□□ 0.9
Rfwd2Q9R1A8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfwd2Q9R1A8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfwd2Q9R1A8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms