Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh17Q9R100 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh17Q9R100 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh17Q9R100 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cdh17Q9R100 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh17Q9R100 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Cdh17Q9R100 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.77■□□□□ 0.75
Cdh17Q9R100 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh17Q9R100 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cdh17Q9R100 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.76■□□□□ 0.75
Cdh17Q9R100 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Cdh17Q9R100 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh17Q9R100 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.75■□□□□ 0.75
Cdh17Q9R100 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh17Q9R100 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh17Q9R100 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh17Q9R100 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh17Q9R100 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Cdh17Q9R100 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh17Q9R100 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh17Q9R100 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh17Q9R100 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cdh17Q9R100 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdh17Q9R100 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh17Q9R100 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh17Q9R100 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdh17Q9R100 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh17Q9R100 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh17Q9R100 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.72■□□□□ 0.75
Cdh17Q9R100 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.72■□□□□ 0.75
Cdh17Q9R100 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.72■□□□□ 0.75
Cdh17Q9R100 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh17Q9R100 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh17Q9R100 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh17Q9R100 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh17Q9R100 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh17Q9R100 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh17Q9R100 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Cdh17Q9R100 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.7■□□□□ 0.74
Cdh17Q9R100 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh17Q9R100 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh17Q9R100 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh17Q9R100 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh17Q9R100 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh17Q9R100 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh17Q9R100 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh17Q9R100 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh17Q9R100 Gm7143-201ENSMUST00000222811 859 ntBASIC19.69■□□□□ 0.74
Cdh17Q9R100 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdh17Q9R100 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdh17Q9R100 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cdh17Q9R100 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Gm40881-201ENSMUST00000223397 166 ntBASIC19.68■□□□□ 0.74
Cdh17Q9R100 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdh17Q9R100 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms