Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SrfQ9JM73 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SrfQ9JM73 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SrfQ9JM73 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SrfQ9JM73 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SrfQ9JM73 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SrfQ9JM73 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SrfQ9JM73 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SrfQ9JM73 Mir6236-201ENSMUST00000184437 123 ntBASIC19.25■□□□□ 0.67
SrfQ9JM73 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SrfQ9JM73 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SrfQ9JM73 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SrfQ9JM73 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SrfQ9JM73 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SrfQ9JM73 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SrfQ9JM73 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.24■□□□□ 0.67
SrfQ9JM73 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SrfQ9JM73 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SrfQ9JM73 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SrfQ9JM73 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.23■□□□□ 0.67
SrfQ9JM73 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
SrfQ9JM73 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SrfQ9JM73 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.22■□□□□ 0.67
SrfQ9JM73 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SrfQ9JM73 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.22■□□□□ 0.67
SrfQ9JM73 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.22■□□□□ 0.67
SrfQ9JM73 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.22■□□□□ 0.67
SrfQ9JM73 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.22■□□□□ 0.67
SrfQ9JM73 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.22■□□□□ 0.67
SrfQ9JM73 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SrfQ9JM73 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SrfQ9JM73 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SrfQ9JM73 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.21■□□□□ 0.67
SrfQ9JM73 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.21■□□□□ 0.67
SrfQ9JM73 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.21■□□□□ 0.67
SrfQ9JM73 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SrfQ9JM73 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SrfQ9JM73 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.2■□□□□ 0.66
SrfQ9JM73 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.2■□□□□ 0.66
SrfQ9JM73 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SrfQ9JM73 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SrfQ9JM73 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.2■□□□□ 0.66
SrfQ9JM73 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.2■□□□□ 0.66
SrfQ9JM73 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SrfQ9JM73 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SrfQ9JM73 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SrfQ9JM73 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SrfQ9JM73 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SrfQ9JM73 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SrfQ9JM73 Gm12933-201ENSMUST00000120203 872 ntBASIC19.19■□□□□ 0.66
SrfQ9JM73 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SrfQ9JM73 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.19■□□□□ 0.66
SrfQ9JM73 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SrfQ9JM73 Gm10602-201ENSMUST00000098239 609 ntBASIC19.19■□□□□ 0.66
SrfQ9JM73 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SrfQ9JM73 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SrfQ9JM73 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SrfQ9JM73 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SrfQ9JM73 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SrfQ9JM73 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SrfQ9JM73 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.17■□□□□ 0.66
SrfQ9JM73 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.17■□□□□ 0.66
SrfQ9JM73 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Gm9988-201ENSMUST00000069786 435 ntBASIC19.17■□□□□ 0.66
SrfQ9JM73 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SrfQ9JM73 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SrfQ9JM73 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SrfQ9JM73 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SrfQ9JM73 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SrfQ9JM73 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.16■□□□□ 0.66
SrfQ9JM73 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.16■□□□□ 0.66
SrfQ9JM73 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SrfQ9JM73 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SrfQ9JM73 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SrfQ9JM73 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms