Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Mir6236-201ENSMUST00000184437 123 ntBASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Herpud2Q9JJC9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Herpud2Q9JJC9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Gm10493-201ENSMUST00000097270 612 ntBASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Herpud2Q9JJC9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herpud2Q9JJC9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herpud2Q9JJC9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herpud2Q9JJC9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Herpud2Q9JJC9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herpud2Q9JJC9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herpud2Q9JJC9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Herpud2Q9JJC9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Herpud2Q9JJC9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Herpud2Q9JJC9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herpud2Q9JJC9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Herpud2Q9JJC9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Herpud2Q9JJC9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.19■□□□□ 0.82
Herpud2Q9JJC9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herpud2Q9JJC9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Herpud2Q9JJC9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herpud2Q9JJC9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.19■□□□□ 0.82
Herpud2Q9JJC9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Herpud2Q9JJC9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Herpud2Q9JJC9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Gm11421-201ENSMUST00000122124 294 ntBASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Herpud2Q9JJC9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.16■□□□□ 0.82
Herpud2Q9JJC9 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms