Protein–RNA interactions for Protein: Q9JI58

Raet1d, Retinoic acid early-inducible protein 1-delta, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1dQ9JI58 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1dQ9JI58 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1dQ9JI58 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1dQ9JI58 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1dQ9JI58 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Raet1dQ9JI58 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Raet1dQ9JI58 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Raet1dQ9JI58 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1dQ9JI58 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1dQ9JI58 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1dQ9JI58 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1dQ9JI58 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1dQ9JI58 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1dQ9JI58 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1dQ9JI58 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1dQ9JI58 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1dQ9JI58 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1dQ9JI58 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Raet1dQ9JI58 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms