Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpxQ9JHS4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClpxQ9JHS4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpxQ9JHS4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.36■□□□□ 0.53
ClpxQ9JHS4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClpxQ9JHS4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Gm5812-201ENSMUST00000061073 957 ntBASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClpxQ9JHS4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ClpxQ9JHS4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ClpxQ9JHS4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.33■□□□□ 0.53
ClpxQ9JHS4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
ClpxQ9JHS4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ClpxQ9JHS4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ClpxQ9JHS4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ClpxQ9JHS4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClpxQ9JHS4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.32■□□□□ 0.52
ClpxQ9JHS4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.32■□□□□ 0.52
ClpxQ9JHS4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClpxQ9JHS4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ClpxQ9JHS4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ClpxQ9JHS4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Gm13238-201ENSMUST00000117655 780 ntBASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ClpxQ9JHS4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ClpxQ9JHS4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Gm15546-201ENSMUST00000122095 826 ntBASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ClpxQ9JHS4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ClpxQ9JHS4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms