Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Gm16437-201ENSMUST00000025669 507 ntBASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4bQ9ES00 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ube4bQ9ES00 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Gm11687-201ENSMUST00000118911 886 ntBASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube4bQ9ES00 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube4bQ9ES00 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ube4bQ9ES00 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube4bQ9ES00 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ube4bQ9ES00 Golph3-205ENSMUST00000228671 2842 ntBASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ube4bQ9ES00 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4bQ9ES00 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4bQ9ES00 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4bQ9ES00 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms