Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lima1Q9ERG0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.92■□□□□ 0.78
Lima1Q9ERG0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lima1Q9ERG0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Gm13238-201ENSMUST00000117655 780 ntBASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lima1Q9ERG0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lima1Q9ERG0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lima1Q9ERG0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Lima1Q9ERG0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Lima1Q9ERG0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lima1Q9ERG0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lima1Q9ERG0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lima1Q9ERG0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lima1Q9ERG0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.86■□□□□ 0.77
Lima1Q9ERG0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lima1Q9ERG0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lima1Q9ERG0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.85■□□□□ 0.77
Lima1Q9ERG0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lima1Q9ERG0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms