Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr9Q9EQU3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.1■□□□□ 0.97
Tlr9Q9EQU3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr9Q9EQU3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr9Q9EQU3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr9Q9EQU3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tlr9Q9EQU3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr9Q9EQU3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr9Q9EQU3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tlr9Q9EQU3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr9Q9EQU3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tlr9Q9EQU3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tlr9Q9EQU3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tlr9Q9EQU3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Tlr9Q9EQU3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tlr9Q9EQU3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tlr9Q9EQU3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tlr9Q9EQU3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr9Q9EQU3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr9Q9EQU3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr9Q9EQU3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Tlr9Q9EQU3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr9Q9EQU3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tlr9Q9EQU3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Gm21956-201ENSMUST00000179946 522 ntBASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tlr9Q9EQU3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Gm13241-201ENSMUST00000094493 780 ntBASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tlr9Q9EQU3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tlr9Q9EQU3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tlr9Q9EQU3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.02■□□□□ 0.96
Tlr9Q9EQU3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tlr9Q9EQU3 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.02■□□□□ 0.96
Tlr9Q9EQU3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tlr9Q9EQU3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tlr9Q9EQU3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tlr9Q9EQU3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tlr9Q9EQU3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tlr9Q9EQU3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tlr9Q9EQU3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms