Protein–RNA interactions for Protein: Q9EPS9

Vmn1r56, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r56Q9EPS9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Gm40881-201ENSMUST00000223397 166 ntBASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Vmn1r56Q9EPS9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vmn1r56Q9EPS9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vmn1r56Q9EPS9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Vmn1r56Q9EPS9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vmn1r56Q9EPS9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vmn1r56Q9EPS9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Vmn1r56Q9EPS9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Vmn1r56Q9EPS9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vmn1r56Q9EPS9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vmn1r56Q9EPS9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18■□□□□ 0.47
Vmn1r56Q9EPS9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Vmn1r56Q9EPS9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Vmn1r56Q9EPS9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Vmn1r56Q9EPS9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vmn1r56Q9EPS9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Vmn1r56Q9EPS9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.99■□□□□ 0.47
Vmn1r56Q9EPS9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vmn1r56Q9EPS9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vmn1r56Q9EPS9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vmn1r56Q9EPS9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Vmn1r56Q9EPS9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vmn1r56Q9EPS9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vmn1r56Q9EPS9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.97■□□□□ 0.47
Vmn1r56Q9EPS9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vmn1r56Q9EPS9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vmn1r56Q9EPS9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vmn1r56Q9EPS9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vmn1r56Q9EPS9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vmn1r56Q9EPS9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vmn1r56Q9EPS9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vmn1r56Q9EPS9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vmn1r56Q9EPS9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Vmn1r56Q9EPS9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Vmn1r56Q9EPS9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.96■□□□□ 0.46
Vmn1r56Q9EPS9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Vmn1r56Q9EPS9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vmn1r56Q9EPS9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Vmn1r56Q9EPS9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.95■□□□□ 0.46
Vmn1r56Q9EPS9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms