Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Golgb1-201ENSMUST00000023534 498 ntBASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Gm12922-201ENSMUST00000120626 809 ntBASIC21■□□□□ 0.95
Chmp2aQ9DB34 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
Chmp2aQ9DB34 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Gm13241-201ENSMUST00000094493 780 ntBASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Gm21956-201ENSMUST00000179946 522 ntBASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms