Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp2aQ9DB34 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp2aQ9DB34 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Golgb1-201ENSMUST00000023534 498 ntBASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp2aQ9DB34 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Gm12922-201ENSMUST00000120626 809 ntBASIC21■□□□□ 0.95
Chmp2aQ9DB34 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Chmp2aQ9DB34 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp2aQ9DB34 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp2aQ9DB34 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp2aQ9DB34 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp2aQ9DB34 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
Chmp2aQ9DB34 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Gm13241-201ENSMUST00000094493 780 ntBASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp2aQ9DB34 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Gm21956-201ENSMUST00000179946 522 ntBASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp2aQ9DB34 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp2aQ9DB34 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms