Protein–RNA interactions for Protein: Q9D995

Cntd1, Cyclin N-terminal domain-containing protein 1, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntd1Q9D995 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntd1Q9D995 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntd1Q9D995 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntd1Q9D995 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntd1Q9D995 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cntd1Q9D995 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cntd1Q9D995 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.18■□□□□ 0.66
Cntd1Q9D995 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntd1Q9D995 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntd1Q9D995 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntd1Q9D995 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.16■□□□□ 0.66
Cntd1Q9D995 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cntd1Q9D995 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.15■□□□□ 0.66
Cntd1Q9D995 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntd1Q9D995 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cntd1Q9D995 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cntd1Q9D995 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cntd1Q9D995 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cntd1Q9D995 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.13■□□□□ 0.65
Cntd1Q9D995 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.13■□□□□ 0.65
Cntd1Q9D995 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cntd1Q9D995 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cntd1Q9D995 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cntd1Q9D995 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.1■□□□□ 0.65
Cntd1Q9D995 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.1■□□□□ 0.65
Cntd1Q9D995 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.1■□□□□ 0.65
Cntd1Q9D995 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cntd1Q9D995 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms