Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ndufa11Q9D8B4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufa11Q9D8B4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndufa11Q9D8B4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa11Q9D8B4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa11Q9D8B4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa11Q9D8B4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa11Q9D8B4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa11Q9D8B4 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.58■□□□□ 0.41
Ndufa11Q9D8B4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndufa11Q9D8B4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.58■□□□□ 0.41
Ndufa11Q9D8B4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.58■□□□□ 0.4
Ndufa11Q9D8B4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndufa11Q9D8B4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndufa11Q9D8B4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndufa11Q9D8B4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa11Q9D8B4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndufa11Q9D8B4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Mir6236-201ENSMUST00000184437 123 ntBASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndufa11Q9D8B4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms