Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.72■□□□□ 0.43
Tmem54Q9D7S1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Gm21956-201ENSMUST00000179946 522 ntBASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tmem54Q9D7S1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tmem54Q9D7S1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tmem54Q9D7S1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.71■□□□□ 0.42
Tmem54Q9D7S1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tmem54Q9D7S1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tmem54Q9D7S1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tmem54Q9D7S1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem54Q9D7S1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem54Q9D7S1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem54Q9D7S1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem54Q9D7S1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem54Q9D7S1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem54Q9D7S1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.65■□□□□ 0.42
Tmem54Q9D7S1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem54Q9D7S1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem54Q9D7S1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem54Q9D7S1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms