Protein–RNA interactions for Protein: Q9D3H9

5530401A14Rik, RIKEN cDNA 5530401A14 gene, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530401A14RikQ9D3H9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530401A14RikQ9D3H9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
5530401A14RikQ9D3H9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530401A14RikQ9D3H9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
5530401A14RikQ9D3H9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
5530401A14RikQ9D3H9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530401A14RikQ9D3H9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530401A14RikQ9D3H9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530401A14RikQ9D3H9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530401A14RikQ9D3H9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
5530401A14RikQ9D3H9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
5530401A14RikQ9D3H9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
5530401A14RikQ9D3H9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
5530401A14RikQ9D3H9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.67■□□□□ 0.58
5530401A14RikQ9D3H9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.67■□□□□ 0.58
5530401A14RikQ9D3H9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
5530401A14RikQ9D3H9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms