Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps33aQ9D2N9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps33aQ9D2N9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps33aQ9D2N9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Vps33aQ9D2N9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.45■■□□□ 1.02
Vps33aQ9D2N9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps33aQ9D2N9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps33aQ9D2N9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Vps33aQ9D2N9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps33aQ9D2N9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 Gm11599-201ENSMUST00000118720 878 ntBASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps33aQ9D2N9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.41■■□□□ 1.02
Vps33aQ9D2N9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps33aQ9D2N9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps33aQ9D2N9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps33aQ9D2N9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps33aQ9D2N9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps33aQ9D2N9 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps33aQ9D2N9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Rarb-207ENSMUST00000225921 2756 ntBASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms