Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf115Q9D0C1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf115Q9D0C1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf115Q9D0C1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Notumos-201ENSMUST00000151998 2659 ntBASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf115Q9D0C1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Rnf115Q9D0C1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf115Q9D0C1 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.29■□□□□ 0.36
Rnf115Q9D0C1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rnf115Q9D0C1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf115Q9D0C1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf115Q9D0C1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf115Q9D0C1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf115Q9D0C1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf115Q9D0C1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf115Q9D0C1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf115Q9D0C1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf115Q9D0C1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rnf115Q9D0C1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rnf115Q9D0C1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf115Q9D0C1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf115Q9D0C1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf115Q9D0C1 Gm43173-201ENSMUST00000202246 593 ntBASIC17.27■□□□□ 0.36
Rnf115Q9D0C1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf115Q9D0C1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Rnf115Q9D0C1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Rnf115Q9D0C1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rnf115Q9D0C1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf115Q9D0C1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf115Q9D0C1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf115Q9D0C1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf115Q9D0C1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf115Q9D0C1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf115Q9D0C1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.2■□□□□ 0.34
Rnf115Q9D0C1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf115Q9D0C1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms