Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mrpl55Q9CZ83 Gm42699-201ENSMUST00000198104 1657 ntBASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mrpl55Q9CZ83 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 AC153524.1-201ENSMUST00000220436 1935 ntBASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mrpl55Q9CZ83 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Gm4430-201ENSMUST00000192413 1943 ntBASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 H3f3aos-201ENSMUST00000097448 2905 ntBASIC13.16□□□□□ -0.3
Mrpl55Q9CZ83 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mrpl55Q9CZ83 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.15□□□□□ -0.31
Mrpl55Q9CZ83 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.15□□□□□ -0.31
Mrpl55Q9CZ83 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Mrpl55Q9CZ83 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mrpl55Q9CZ83 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mrpl55Q9CZ83 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Mrpl55Q9CZ83 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms