Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpusd4Q9CWX4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpusd4Q9CWX4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpusd4Q9CWX4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpusd4Q9CWX4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpusd4Q9CWX4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rpusd4Q9CWX4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rpusd4Q9CWX4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpusd4Q9CWX4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Gm40881-201ENSMUST00000223397 166 ntBASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rpusd4Q9CWX4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpusd4Q9CWX4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rpusd4Q9CWX4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Etf1-202ENSMUST00000180351 108 ntBASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpusd4Q9CWX4 Gm14117-201ENSMUST00000122417 843 ntBASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpusd4Q9CWX4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpusd4Q9CWX4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.89■□□□□ 0.29
Rpusd4Q9CWX4 Gm7417-201ENSMUST00000192950 473 ntBASIC16.89■□□□□ 0.29
Rpusd4Q9CWX4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpusd4Q9CWX4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rpusd4Q9CWX4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.89■□□□□ 0.29
Rpusd4Q9CWX4 Golph3-202ENSMUST00000226517 2359 ntBASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Rpusd4Q9CWX4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpusd4Q9CWX4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpusd4Q9CWX4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms