Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf135Q9CWS1 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf135Q9CWS1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rnf135Q9CWS1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf135Q9CWS1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21■□□□□ 0.95
Rnf135Q9CWS1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21■□□□□ 0.95
Rnf135Q9CWS1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21■□□□□ 0.95
Rnf135Q9CWS1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Rnf135Q9CWS1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.99■□□□□ 0.95
Rnf135Q9CWS1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf135Q9CWS1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Rnf135Q9CWS1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.99■□□□□ 0.95
Rnf135Q9CWS1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf135Q9CWS1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf135Q9CWS1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rnf135Q9CWS1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf135Q9CWS1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf135Q9CWS1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf135Q9CWS1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.97■□□□□ 0.95
Rnf135Q9CWS1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf135Q9CWS1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Rnf135Q9CWS1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf135Q9CWS1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Gm7417-201ENSMUST00000192950 473 ntBASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rnf135Q9CWS1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.94■□□□□ 0.94
Rnf135Q9CWS1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms