Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Gm24970-201ENSMUST00000175582 82 ntBASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pfdn1Q9CWM4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pfdn1Q9CWM4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn1Q9CWM4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn1Q9CWM4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pfdn1Q9CWM4 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pfdn1Q9CWM4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pfdn1Q9CWM4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Rarb-207ENSMUST00000225921 2756 ntBASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pfdn1Q9CWM4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pfdn1Q9CWM4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn1Q9CWM4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn1Q9CWM4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn1Q9CWM4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Pfdn1Q9CWM4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pfdn1Q9CWM4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn1Q9CWM4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn1Q9CWM4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn1Q9CWM4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn1Q9CWM4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pfdn1Q9CWM4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.7■□□□□ 0.42
Pfdn1Q9CWM4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms