Protein–RNA interactions for Protein: Q9CPY3

Cdca5, Sororin, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca5Q9CPY3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Gm9847-201ENSMUST00000052528 599 ntBASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdca5Q9CPY3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdca5Q9CPY3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdca5Q9CPY3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdca5Q9CPY3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdca5Q9CPY3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca5Q9CPY3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdca5Q9CPY3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca5Q9CPY3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Cdca5Q9CPY3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca5Q9CPY3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca5Q9CPY3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdca5Q9CPY3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdca5Q9CPY3 Gm22238-201ENSMUST00000175222 88 ntBASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdca5Q9CPY3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdca5Q9CPY3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdca5Q9CPY3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdca5Q9CPY3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdca5Q9CPY3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Gm40881-201ENSMUST00000223397 166 ntBASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cdca5Q9CPY3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdca5Q9CPY3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdca5Q9CPY3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdca5Q9CPY3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdca5Q9CPY3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms