Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cntnap4Q99P47 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cntnap4Q99P47 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Gm43017-201ENSMUST00000198296 752 ntBASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cntnap4Q99P47 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntnap4Q99P47 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Gm43173-201ENSMUST00000202246 593 ntBASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntnap4Q99P47 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 Gm8493-201ENSMUST00000196881 489 ntBASIC21.68■■□□□ 1.06
Cntnap4Q99P47 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cntnap4Q99P47 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cntnap4Q99P47 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntnap4Q99P47 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cntnap4Q99P47 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms