Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd1Q99J36 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18■□□□□ 0.47
Thumpd1Q99J36 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18■□□□□ 0.47
Thumpd1Q99J36 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Thumpd1Q99J36 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd1Q99J36 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Thumpd1Q99J36 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.99■□□□□ 0.47
Thumpd1Q99J36 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Thumpd1Q99J36 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd1Q99J36 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd1Q99J36 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Thumpd1Q99J36 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd1Q99J36 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd1Q99J36 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd1Q99J36 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd1Q99J36 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.98■□□□□ 0.47
Thumpd1Q99J36 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd1Q99J36 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.97■□□□□ 0.47
Thumpd1Q99J36 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd1Q99J36 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd1Q99J36 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Thumpd1Q99J36 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.96■□□□□ 0.47
Thumpd1Q99J36 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd1Q99J36 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd1Q99J36 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Thumpd1Q99J36 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Thumpd1Q99J36 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Thumpd1Q99J36 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Thumpd1Q99J36 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms