Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pcdha3Q91Y16 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha3Q91Y16 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pcdha3Q91Y16 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pcdha3Q91Y16 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Pcdha3Q91Y16 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha3Q91Y16 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha3Q91Y16 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha3Q91Y16 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha3Q91Y16 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha3Q91Y16 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Gm7143-201ENSMUST00000222811 859 ntBASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha3Q91Y16 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdha3Q91Y16 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha3Q91Y16 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha3Q91Y16 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.08■□□□□ 0.97
Pcdha3Q91Y16 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Pcdha3Q91Y16 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha3Q91Y16 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha3Q91Y16 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha3Q91Y16 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha3Q91Y16 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha3Q91Y16 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha3Q91Y16 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha3Q91Y16 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha3Q91Y16 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Golgb1-201ENSMUST00000023534 498 ntBASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha3Q91Y16 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha3Q91Y16 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdha3Q91Y16 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha3Q91Y16 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha3Q91Y16 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha3Q91Y16 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha3Q91Y16 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha3Q91Y16 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha3Q91Y16 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms