Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdha6Q91Y14 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha6Q91Y14 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdha6Q91Y14 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha6Q91Y14 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha6Q91Y14 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha6Q91Y14 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha6Q91Y14 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha6Q91Y14 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha6Q91Y14 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha6Q91Y14 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha6Q91Y14 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Gm15820-201ENSMUST00000201566 728 ntBASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha6Q91Y14 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdha6Q91Y14 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha6Q91Y14 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha6Q91Y14 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha6Q91Y14 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdha6Q91Y14 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha6Q91Y14 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdha6Q91Y14 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdha6Q91Y14 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha6Q91Y14 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdha6Q91Y14 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcdha6Q91Y14 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.17■□□□□ 0.82
Pcdha6Q91Y14 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha6Q91Y14 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdha6Q91Y14 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdha6Q91Y14 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Gm5812-201ENSMUST00000061073 957 ntBASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdha6Q91Y14 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha6Q91Y14 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha6Q91Y14 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Pcdha6Q91Y14 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha6Q91Y14 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha6Q91Y14 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdha6Q91Y14 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha6Q91Y14 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha6Q91Y14 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha6Q91Y14 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdha6Q91Y14 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdha6Q91Y14 Gm7143-201ENSMUST00000222811 859 ntBASIC20.14■□□□□ 0.81
Pcdha6Q91Y14 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdha6Q91Y14 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdha6Q91Y14 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha6Q91Y14 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdha6Q91Y14 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Pcdha6Q91Y14 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms