Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha9Q91Y11 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha9Q91Y11 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha9Q91Y11 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha9Q91Y11 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha9Q91Y11 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha9Q91Y11 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdha9Q91Y11 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Pcdha9Q91Y11 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha9Q91Y11 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Pcdha9Q91Y11 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha9Q91Y11 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha9Q91Y11 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha9Q91Y11 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdha9Q91Y11 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha9Q91Y11 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdha9Q91Y11 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha9Q91Y11 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha9Q91Y11 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdha9Q91Y11 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha9Q91Y11 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.53■■□□□ 1.04
Pcdha9Q91Y11 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha9Q91Y11 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha9Q91Y11 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha9Q91Y11 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha9Q91Y11 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdha9Q91Y11 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha9Q91Y11 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Gm13241-201ENSMUST00000094493 780 ntBASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha9Q91Y11 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha9Q91Y11 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha9Q91Y11 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Pcdha9Q91Y11 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha9Q91Y11 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha9Q91Y11 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdha9Q91Y11 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha9Q91Y11 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha9Q91Y11 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Mir6236-201ENSMUST00000184437 123 ntBASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha9Q91Y11 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha9Q91Y11 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.47■■□□□ 1.03
Pcdha9Q91Y11 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms