Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb1Q91Y08 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb1Q91Y08 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb1Q91Y08 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb1Q91Y08 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhb1Q91Y08 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhb1Q91Y08 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb1Q91Y08 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhb1Q91Y08 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 Gm22238-201ENSMUST00000175222 88 ntBASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pcdhb1Q91Y08 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Rps24-207ENSMUST00000224568 714 ntBASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.04■□□□□ 0.96
Pcdhb1Q91Y08 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb1Q91Y08 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Pcdhb1Q91Y08 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb1Q91Y08 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Pcdhb1Q91Y08 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Gm14117-201ENSMUST00000122417 843 ntBASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb1Q91Y08 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb1Q91Y08 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Gm43530-201ENSMUST00000195920 274 ntBASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb1Q91Y08 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb1Q91Y08 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb1Q91Y08 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb1Q91Y08 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhb1Q91Y08 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb1Q91Y08 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms